Only about 187 adults and children were successfully evacuated on Wednesday as against the 320 Nigerians expected back home.
The flight arrived the Murtala Muhammed International Airport, Lagos, at 9.43pm.
One of the returnees, Uche Victor, told journalists that he left his wife who he said was a Cameronian and a young daughter behind.
He said, “I’m bleeding because I left my wife and baby but I have to come back because my mother cries for me to return. If something happens to me she will suffer.
“I left my business, I came back with nothing. South Africans believe all Nigerians are drug pushers, but I don’t know the colour of any drug.”
Victor, who explained that he left Nigeria for South Africa in 2007, explained that the attacks were anger against the government.
“They are only venting their anger on foreigners. They started with black and will move to whites,” he said.
According to him, the flight would have returned earlier but the South African government made it difficult.
“They didn’t want us to go but for Nigeria’s consulate,” he added.
Another returnee from Abia State, who gave his name as Onuoha, said a lot of Nigerians were still stranded as they could not return with their properties.
Aliu Saheed, from Osun State, said his shop was burgled and he came back home empty-handed.
“But I’m happy to be home, I’m not going back again,” he said.
S’A cancels visas issued to returning Nigerians
One of our correspondents learnt that the South African authorities went further to cancel visas that were issued to the returning Nigerians.
A picture on Facebook showed a Nigerian passport with a cancelled South African visa as of September 10.
The Chairman, Nigerian Diaspora Commission, Mrs Abike Dabiri-Erewa, said there was 15 hours delay before the flight left South Africa.
She had earlier told journalists that the South African authorities brought new immigration rules before the affected Nigerians could be allowed to board the aircraft.
According to Dabiri-Erewa, the Federal Government is giving N40,000 worth of airtime to last them for two months as well as stipend of N10,000 for transport.
She also said there were plans for the Bank of Industry to provide some money for the returnees to start small businesses.
Meanwhile, the Chief Operating Officer of Air Peace, Mrs Toyin Olajide, said the evacuation would cost the airline about N300m.
Olajide said the cost would include payment of passenger service charge, aeronautical and other charges.